MedSegPy
0.0.1
User Guide
Installation
Getting Started with MedSegPy
Extend MedSegPy’s Defaults
Use Custom Datasets
Use Custom Dataloaders
Use Models
Training
Evaluation
Use Configs
API Documentation
MedSegPy
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User Guide
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User Guide
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Installation
Requirements
Build MedSegPy from Source
Step-by-Step Guide
Configuring Paths (optional)
Getting Started with MedSegPy
Training & Evaluation in Command Line
Extend MedSegPy’s Defaults
Use Custom Datasets
Data Augmentation
Data format
Register Dataset
Register Metadata for a Dataset
Update the Config for New Datasets
Use Custom Dataloaders
How the Existing Dataloader Works
Dataloader example
Write a Custom Dataloader
Use a Custom Dataloader
Use Models
Making a Custom Model
Training
Logging of Metrics
Evaluation
Use Configs
Use Configs
Adding New Fields
Best Practice with Configs